Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdhga3Q91XY5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gm12341-201ENSMUST00000119724 503 ntBASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gm37917-201ENSMUST00000194711 392 ntBASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gm42550-201ENSMUST00000201553 960 ntBASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gm18307-201ENSMUST00000206864 949 ntBASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdhga3Q91XY5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Mir6392-201ENSMUST00000184924 108 ntBASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Gm38223-201ENSMUST00000194484 695 ntBASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhga3Q91XY5 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms