Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.03■□□□□ -0
Ddx41Q91VN6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ddx41Q91VN6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx41Q91VN6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx41Q91VN6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx41Q91VN6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx41Q91VN6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ddx41Q91VN6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx41Q91VN6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Ddx41Q91VN6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx41Q91VN6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
Ddx41Q91VN6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Ddx41Q91VN6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx41Q91VN6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ddx41Q91VN6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx41Q91VN6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ddx41Q91VN6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.02■□□□□ -0
Ddx41Q91VN6 Gm27514-201ENSMUST00000183692 110 ntBASIC15.02■□□□□ -0
Ddx41Q91VN6 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.02■□□□□ -0
Ddx41Q91VN6 Gm45331-201ENSMUST00000209868 554 ntBASIC15.02■□□□□ -0
Ddx41Q91VN6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ddx41Q91VN6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ddx41Q91VN6 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Paupar-201ENSMUST00000194826 3482 ntBASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.01□□□□□ -0.01
Ddx41Q91VN6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx41Q91VN6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15□□□□□ -0.01
Ddx41Q91VN6 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx41Q91VN6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ddx41Q91VN6 Gm10040-201ENSMUST00000080726 1662 ntBASIC15□□□□□ -0.01
Ddx41Q91VN6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx41Q91VN6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx41Q91VN6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx41Q91VN6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx41Q91VN6 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx41Q91VN6 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15□□□□□ -0.01
Ddx41Q91VN6 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx41Q91VN6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Ddx41Q91VN6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15□□□□□ -0.01
Ddx41Q91VN6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15□□□□□ -0.01
Ddx41Q91VN6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ddx41Q91VN6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15□□□□□ -0.01
Ddx41Q91VN6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx41Q91VN6 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ddx41Q91VN6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ddx41Q91VN6 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ddx41Q91VN6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ddx41Q91VN6 Gm44891-201ENSMUST00000208817 2223 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms