Protein–RNA interactions for Protein: Q8VCS3

Fam20b, Glycosaminoglycan xylosylkinase, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam20bQ8VCS3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Fam20bQ8VCS3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Gm8927-201ENSMUST00000181978 981 ntBASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Gm10253-201ENSMUST00000194270 940 ntBASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Gm3222-201ENSMUST00000071282 990 ntBASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Fam20bQ8VCS3 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fam20bQ8VCS3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.47
Fam20bQ8VCS3 Rubie-203ENSMUST00000227803 2430 ntBASIC12.15□□□□□ -0.47
Fam20bQ8VCS3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Fam20bQ8VCS3 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Mir449b-201ENSMUST00000104833 80 ntBASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Fam20bQ8VCS3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms