Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Gm8515-201ENSMUST00000194852 576 ntBASIC12.64□□□□□ -0.39
Rnf8Q8VC56 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.64□□□□□ -0.39
Rnf8Q8VC56 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rnf8Q8VC56 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Gm18018-201ENSMUST00000198273 408 ntBASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rnf8Q8VC56 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.62□□□□□ -0.39
Rnf8Q8VC56 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Gm15770-201ENSMUST00000117498 584 ntBASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Gm45668-201ENSMUST00000211271 493 ntBASIC12.62□□□□□ -0.39
Rnf8Q8VC56 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rnf8Q8VC56 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms