Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Gm2231-201ENSMUST00000125661 612 ntBASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Gm27331-201ENSMUST00000183705 60 ntBASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Gm29649-201ENSMUST00000185649 419 ntBASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpap2Q8VC34 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpap2Q8VC34 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Rpap2Q8VC34 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.33□□□□□ -0.11
Rpap2Q8VC34 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpap2Q8VC34 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Gm11637-201ENSMUST00000120601 592 ntBASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpap2Q8VC34 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Gm29705-201ENSMUST00000212598 474 ntBASIC14.32□□□□□ -0.12
Rpap2Q8VC34 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpap2Q8VC34 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rpap2Q8VC34 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.31□□□□□ -0.12
Rpap2Q8VC34 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpap2Q8VC34 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms