Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Mir5132-201ENSMUST00000175166 71 ntBASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Mir7070-201ENSMUST00000183657 86 ntBASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Gm22058-201ENSMUST00000083393 310 ntBASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp7Q8R1T1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Gm43068-201ENSMUST00000201095 1273 ntBASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Gm13097-201ENSMUST00000210722 397 ntBASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp7Q8R1T1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Chmp7Q8R1T1 Daam2-202ENSMUST00000224595 1926 ntBASIC16.64■□□□□ 0.26
Chmp7Q8R1T1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Chmp7Q8R1T1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Chmp7Q8R1T1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Chmp7Q8R1T1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Gm38092-201ENSMUST00000195600 653 ntBASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Gm5869-201ENSMUST00000200248 1257 ntBASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp7Q8R1T1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp7Q8R1T1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms