Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sf3a1Q8K4Z5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Gm8805-201ENSMUST00000117848 313 ntBASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Gm6266-201ENSMUST00000203844 806 ntBASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Gm2824-203ENSMUST00000226189 1228 ntBASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sf3a1Q8K4Z5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Gm18041-201ENSMUST00000218210 618 ntBASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sf3a1Q8K4Z5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Gm13829-201ENSMUST00000119600 138 ntBASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Gm28693-202ENSMUST00000190758 331 ntBASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Gm43433-201ENSMUST00000196573 481 ntBASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Gm5186-201ENSMUST00000218781 920 ntBASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sf3a1Q8K4Z5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sf3a1Q8K4Z5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms