Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.35□□□□□ -0.43
Clrn1Q8K445 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn1Q8K445 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn1Q8K445 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn1Q8K445 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn1Q8K445 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Clrn1Q8K445 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.35□□□□□ -0.43
Clrn1Q8K445 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn1Q8K445 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn1Q8K445 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Gm15806-201ENSMUST00000120696 955 ntBASIC12.34□□□□□ -0.43
Clrn1Q8K445 Mir1894-201ENSMUST00000122802 81 ntBASIC12.34□□□□□ -0.43
Clrn1Q8K445 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Gm6244-201ENSMUST00000178732 841 ntBASIC12.34□□□□□ -0.43
Clrn1Q8K445 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.34□□□□□ -0.43
Clrn1Q8K445 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.34□□□□□ -0.43
Clrn1Q8K445 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.34□□□□□ -0.43
Clrn1Q8K445 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clrn1Q8K445 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.34□□□□□ -0.43
Clrn1Q8K445 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Clrn1Q8K445 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Clrn1Q8K445 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.33□□□□□ -0.43
Clrn1Q8K445 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Clrn1Q8K445 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Gm11478-201ENSMUST00000117851 599 ntBASIC12.33□□□□□ -0.44
Clrn1Q8K445 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Gm11424-201ENSMUST00000121929 829 ntBASIC12.33□□□□□ -0.44
Clrn1Q8K445 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Gm27892-201ENSMUST00000185017 106 ntBASIC12.33□□□□□ -0.44
Clrn1Q8K445 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.33□□□□□ -0.44
Clrn1Q8K445 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.33□□□□□ -0.44
Clrn1Q8K445 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.33□□□□□ -0.44
Clrn1Q8K445 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clrn1Q8K445 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.32□□□□□ -0.44
Clrn1Q8K445 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clrn1Q8K445 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms