Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rfwd3Q8CIK8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Gm6447-201ENSMUST00000118905 835 ntBASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Gm11814-201ENSMUST00000119515 929 ntBASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Gm45841-201ENSMUST00000207700 164 ntBASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rfwd3Q8CIK8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Gm10012-201ENSMUST00000078252 192 ntBASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rfwd3Q8CIK8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms