Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ccdc87Q8CDL9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ccdc87Q8CDL9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Gm5745-201ENSMUST00000183748 313 ntBASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Gm17795-201ENSMUST00000214505 757 ntBASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccdc87Q8CDL9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms