Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Gm44855-201ENSMUST00000205725 362 ntBASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Gm5425-201ENSMUST00000214125 459 ntBASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lrif1Q8CDD9 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Gm15393-201ENSMUST00000120499 219 ntBASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Gm2423-201ENSMUST00000074863 733 ntBASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lrif1Q8CDD9 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Gm29667-201ENSMUST00000190817 490 ntBASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lrif1Q8CDD9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lrif1Q8CDD9 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms