Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Gm15806-201ENSMUST00000120696 955 ntBASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Gm9002-201ENSMUST00000178437 499 ntBASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Gm24196-201ENSMUST00000179161 110 ntBASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Gm27892-201ENSMUST00000185017 106 ntBASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim9Q8C7M3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Gm8652-201ENSMUST00000181363 964 ntBASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Gm17794-201ENSMUST00000220252 955 ntBASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim9Q8C7M3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Gm37922-201ENSMUST00000195596 455 ntBASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim9Q8C7M3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms