Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Gm8598-201ENSMUST00000221184 836 ntBASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sh3rf3Q8C120 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Mir874-201ENSMUST00000104769 76 ntBASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Gm18473-201ENSMUST00000220543 868 ntBASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sh3rf3Q8C120 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sh3rf3Q8C120 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms