Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm24548-201ENSMUST00000158650 108 ntBASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Gm27243-201ENSMUST00000183964 521 ntBASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Gm24526-201ENSMUST00000082921 158 ntBASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sh3rf2Q8BZT2 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Gm12502-201ENSMUST00000120197 444 ntBASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Gm22121-201ENSMUST00000175148 54 ntBASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Gm6621-201ENSMUST00000193251 772 ntBASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.23□□□□□ -0.29
Sh3rf2Q8BZT2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Snord83b-201ENSMUST00000104546 94 ntBASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Gm14704-201ENSMUST00000120300 874 ntBASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Gm19931-201ENSMUST00000198920 368 ntBASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
Sh3rf2Q8BZT2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms