Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm5161-201ENSMUST00000075243 853 ntBASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Gm24447-201ENSMUST00000083977 338 ntBASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cpsf4Q8BQZ5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Mir874-201ENSMUST00000104769 76 ntBASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Gm5035-201ENSMUST00000215581 927 ntBASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cpsf4Q8BQZ5 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Gm15806-201ENSMUST00000120696 955 ntBASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Gm8463-201ENSMUST00000208573 613 ntBASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cpsf4Q8BQZ5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms