Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdhr3Q8BL00 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Gm20445-201ENSMUST00000061905 565 ntBASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdhr3Q8BL00 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Gm6447-201ENSMUST00000118905 835 ntBASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdhr3Q8BL00 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cdhr3Q8BL00 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms