Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Samm50Q8BGH2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Samm50Q8BGH2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Samm50Q8BGH2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.33■□□□□ 0.04
Samm50Q8BGH2 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Samm50Q8BGH2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Samm50Q8BGH2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Gm15806-201ENSMUST00000120696 955 ntBASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Gm15429-201ENSMUST00000151268 798 ntBASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Gm44487-201ENSMUST00000205145 325 ntBASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms