Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm8396-201ENSMUST00000057361 823 ntBASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim6Q8BGE7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Gm27321-201ENSMUST00000185021 205 ntBASIC13.9□□□□□ -0.18
Trim6Q8BGE7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Gm17330-201ENSMUST00000221047 165 ntBASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Gm6888-201ENSMUST00000221983 706 ntBASIC13.9□□□□□ -0.18
Trim6Q8BGE7 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trim6Q8BGE7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.9□□□□□ -0.19
Trim6Q8BGE7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trim6Q8BGE7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Trim6Q8BGE7 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.9□□□□□ -0.19
Trim6Q8BGE7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Gm27618-201ENSMUST00000183671 60 ntBASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim6Q8BGE7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms