Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 Gm8810-201ENSMUST00000172895 754 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Proscos-202ENSMUST00000178990 666 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 CT009754.4-201ENSMUST00000221430 565 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ubp1Q811S7 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.93□□□□□ -0.34
Ubp1Q811S7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Gm11803-201ENSMUST00000119966 444 ntBASIC12.92□□□□□ -0.34
Ubp1Q811S7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Gm21156-201ENSMUST00000189693 869 ntBASIC12.92□□□□□ -0.34
Ubp1Q811S7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.92□□□□□ -0.34
Ubp1Q811S7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.92□□□□□ -0.34
Ubp1Q811S7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Gm16372-201ENSMUST00000073088 450 ntBASIC12.92□□□□□ -0.34
Ubp1Q811S7 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ubp1Q811S7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Mir874-201ENSMUST00000104769 76 ntBASIC12.91□□□□□ -0.34
Ubp1Q811S7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Gm16202-201ENSMUST00000117532 544 ntBASIC12.91□□□□□ -0.34
Ubp1Q811S7 Gm11814-201ENSMUST00000119515 929 ntBASIC12.91□□□□□ -0.34
Ubp1Q811S7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Gm18041-201ENSMUST00000218210 618 ntBASIC12.91□□□□□ -0.34
Ubp1Q811S7 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC12.91□□□□□ -0.34
Ubp1Q811S7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ubp1Q811S7 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ubp1Q811S7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ubp1Q811S7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms