Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh8Q7TSK3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Gm13123-201ENSMUST00000122173 492 ntBASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Gm26927-201ENSMUST00000182385 965 ntBASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh8Q7TSK3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Gm2231-201ENSMUST00000125661 612 ntBASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Gm38002-201ENSMUST00000193255 180 ntBASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.9□□□□□ -0.34
Pcdh8Q7TSK3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh8Q7TSK3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh8Q7TSK3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms