Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rnf220Q6PDX6 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Mir1895-201ENSMUST00000122615 79 ntBASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 AA543401-201ENSMUST00000164248 1269 ntBASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Gm18049-201ENSMUST00000208909 581 ntBASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.38□□□□□ -0.43
Rnf220Q6PDX6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Gm25287-201ENSMUST00000103846 110 ntBASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Gm22918-201ENSMUST00000103855 110 ntBASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Gm13823-201ENSMUST00000119930 345 ntBASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Gm18889-201ENSMUST00000174284 929 ntBASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms