Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smarcc2Q6PDG5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcc2Q6PDG5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.27■□□□□ 0.03
Smarcc2Q6PDG5 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Smarcc2Q6PDG5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcc2Q6PDG5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcc2Q6PDG5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcc2Q6PDG5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcc2Q6PDG5 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Smarcc2Q6PDG5 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcc2Q6PDG5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smarcc2Q6PDG5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smarcc2Q6PDG5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smarcc2Q6PDG5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Gm14350-201ENSMUST00000116642 640 ntBASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Gm27847-201ENSMUST00000183711 107 ntBASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Gm27375-201ENSMUST00000183799 107 ntBASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Gm25857-201ENSMUST00000082788 129 ntBASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smarcc2Q6PDG5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms