Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Krt39Q6IFX4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.46□□□□□ -0.1
Krt39Q6IFX4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Krt39Q6IFX4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Krt39Q6IFX4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Krt39Q6IFX4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Krt39Q6IFX4 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.46□□□□□ -0.1
Krt39Q6IFX4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Krt39Q6IFX4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Gm15321-201ENSMUST00000121290 288 ntBASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Gm5866-201ENSMUST00000177881 973 ntBASIC14.45□□□□□ -0.1
Krt39Q6IFX4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Gm44855-201ENSMUST00000205725 362 ntBASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Krt39Q6IFX4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Krt39Q6IFX4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Krt39Q6IFX4 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms