Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Krt42Q6IFX2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Krt42Q6IFX2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Gm9229-201ENSMUST00000222777 126 ntBASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.39□□□□□ -0.27
Krt42Q6IFX2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Gm15393-201ENSMUST00000120499 219 ntBASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Krt42Q6IFX2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.38□□□□□ -0.27
Krt42Q6IFX2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Gm18733-201ENSMUST00000173950 856 ntBASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Gm28630-201ENSMUST00000187806 498 ntBASIC13.37□□□□□ -0.27
Krt42Q6IFX2 Gm43125-201ENSMUST00000201724 730 ntBASIC13.37□□□□□ -0.27
Krt42Q6IFX2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Krt42Q6IFX2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms