Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ndufa4Q62425 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Gm18889-201ENSMUST00000174284 929 ntBASIC9.46□□□□□ -0.9
Ndufa4Q62425 Gm29541-201ENSMUST00000191351 678 ntBASIC9.46□□□□□ -0.9
Ndufa4Q62425 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC9.46□□□□□ -0.9
Ndufa4Q62425 AC155252.2-201ENSMUST00000226946 680 ntBASIC9.46□□□□□ -0.9
Ndufa4Q62425 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.46□□□□□ -0.9
Ndufa4Q62425 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ndufa4Q62425 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.45□□□□□ -0.9
Ndufa4Q62425 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Gm12260-201ENSMUST00000122447 411 ntBASIC9.45□□□□□ -0.9
Ndufa4Q62425 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Gm25948-201ENSMUST00000175334 112 ntBASIC9.45□□□□□ -0.9
Ndufa4Q62425 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.45□□□□□ -0.9
Ndufa4Q62425 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ndufa4Q62425 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms