Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sox17Q61473 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.25□□□□□ -0.45
Sox17Q61473 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.25□□□□□ -0.45
Sox17Q61473 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sox17Q61473 Gm5264-201ENSMUST00000190584 848 ntBASIC12.25□□□□□ -0.45
Sox17Q61473 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.25□□□□□ -0.45
Sox17Q61473 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.25□□□□□ -0.45
Sox17Q61473 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sox17Q61473 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.25□□□□□ -0.45
Sox17Q61473 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.25□□□□□ -0.45
Sox17Q61473 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Sox17Q61473 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sox17Q61473 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox17Q61473 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sox17Q61473 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.25□□□□□ -0.45
Sox17Q61473 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sox17Q61473 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.24□□□□□ -0.45
Sox17Q61473 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.24□□□□□ -0.45
Sox17Q61473 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sox17Q61473 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Sox17Q61473 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sox17Q61473 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.24□□□□□ -0.45
Sox17Q61473 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.24□□□□□ -0.45
Sox17Q61473 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.24□□□□□ -0.45
Sox17Q61473 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.24□□□□□ -0.45
Sox17Q61473 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.24□□□□□ -0.45
Sox17Q61473 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.24□□□□□ -0.45
Sox17Q61473 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.24□□□□□ -0.45
Sox17Q61473 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.24□□□□□ -0.45
Sox17Q61473 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sox17Q61473 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sox17Q61473 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Sox17Q61473 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sox17Q61473 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.23□□□□□ -0.45
Sox17Q61473 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox17Q61473 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.23□□□□□ -0.45
Sox17Q61473 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox17Q61473 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox17Q61473 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Sox17Q61473 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox17Q61473 Gm27622-201ENSMUST00000183779 60 ntBASIC12.23□□□□□ -0.45
Sox17Q61473 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox17Q61473 Gm19931-201ENSMUST00000198920 368 ntBASIC12.23□□□□□ -0.45
Sox17Q61473 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.23□□□□□ -0.45
Sox17Q61473 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Sox17Q61473 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Sox17Q61473 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sox17Q61473 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sox17Q61473 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Sox17Q61473 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms