Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col12a1Q60847 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.57□□□□□ -0.4
Col12a1Q60847 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.57□□□□□ -0.4
Col12a1Q60847 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Gm6485-201ENSMUST00000160676 439 ntBASIC12.57□□□□□ -0.4
Col12a1Q60847 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Gm22877-201ENSMUST00000175451 105 ntBASIC12.57□□□□□ -0.4
Col12a1Q60847 Gm43962-201ENSMUST00000203898 190 ntBASIC12.57□□□□□ -0.4
Col12a1Q60847 Gm17831-201ENSMUST00000205579 900 ntBASIC12.57□□□□□ -0.4
Col12a1Q60847 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.57□□□□□ -0.4
Col12a1Q60847 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col12a1Q60847 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.56□□□□□ -0.4
Col12a1Q60847 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.56□□□□□ -0.4
Col12a1Q60847 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.56□□□□□ -0.4
Col12a1Q60847 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.56□□□□□ -0.4
Col12a1Q60847 Gm45500-201ENSMUST00000211676 803 ntBASIC12.56□□□□□ -0.4
Col12a1Q60847 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.56□□□□□ -0.4
Col12a1Q60847 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Gm12516-201ENSMUST00000120819 385 ntBASIC12.56□□□□□ -0.4
Col12a1Q60847 Gm12196-201ENSMUST00000120954 262 ntBASIC12.56□□□□□ -0.4
Col12a1Q60847 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.56□□□□□ -0.4
Col12a1Q60847 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
Col12a1Q60847 Gm807-202ENSMUST00000224929 408 ntBASIC12.56□□□□□ -0.4
Col12a1Q60847 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.56□□□□□ -0.4
Col12a1Q60847 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
Col12a1Q60847 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.56□□□□□ -0.4
Col12a1Q60847 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col12a1Q60847 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Gm8199-201ENSMUST00000121323 823 ntBASIC12.55□□□□□ -0.4
Col12a1Q60847 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Gm43752-201ENSMUST00000198475 697 ntBASIC12.55□□□□□ -0.4
Col12a1Q60847 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.55□□□□□ -0.4
Col12a1Q60847 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col12a1Q60847 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.55□□□□□ -0.4
Col12a1Q60847 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Col12a1Q60847 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Col12a1Q60847 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col12a1Q60847 Gm13549-201ENSMUST00000118339 796 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms