Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ClpbQ60649 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ClpbQ60649 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.57□□□□□ -0.4
ClpbQ60649 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.57□□□□□ -0.4
ClpbQ60649 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ClpbQ60649 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ClpbQ60649 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ClpbQ60649 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.56□□□□□ -0.4
ClpbQ60649 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
ClpbQ60649 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ClpbQ60649 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ClpbQ60649 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.56□□□□□ -0.4
ClpbQ60649 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.56□□□□□ -0.4
ClpbQ60649 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Gm12403-201ENSMUST00000121384 959 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.56□□□□□ -0.4
ClpbQ60649 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.56□□□□□ -0.4
ClpbQ60649 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.56□□□□□ -0.4
ClpbQ60649 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.56□□□□□ -0.4
ClpbQ60649 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Gm6152-201ENSMUST00000151704 340 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ClpbQ60649 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Gm6266-201ENSMUST00000203844 806 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Gm45841-201ENSMUST00000207700 164 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ClpbQ60649 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.56□□□□□ -0.4
ClpbQ60649 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ClpbQ60649 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ClpbQ60649 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ClpbQ60649 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.56□□□□□ -0.4
ClpbQ60649 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ClpbQ60649 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ClpbQ60649 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
ClpbQ60649 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.55□□□□□ -0.4
ClpbQ60649 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.55□□□□□ -0.4
ClpbQ60649 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
ClpbQ60649 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.55□□□□□ -0.4
ClpbQ60649 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
ClpbQ60649 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Gm13612-201ENSMUST00000119276 390 ntBASIC12.55□□□□□ -0.4
ClpbQ60649 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
ClpbQ60649 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.55□□□□□ -0.4
ClpbQ60649 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.55□□□□□ -0.4
ClpbQ60649 Gm29608-201ENSMUST00000190444 463 ntBASIC12.55□□□□□ -0.4
ClpbQ60649 Gm43438-201ENSMUST00000198133 379 ntBASIC12.55□□□□□ -0.4
ClpbQ60649 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.55□□□□□ -0.4
ClpbQ60649 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.55□□□□□ -0.4
ClpbQ60649 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.55□□□□□ -0.4
ClpbQ60649 Itm2b-204ENSMUST00000228637 783 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms