Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prdm1Q60636 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.27■□□□□ 0.03
Prdm1Q60636 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Prdm1Q60636 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.26■□□□□ 0.03
Prdm1Q60636 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.26■□□□□ 0.03
Prdm1Q60636 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Prdm1Q60636 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Prdm1Q60636 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.26■□□□□ 0.03
Prdm1Q60636 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.26■□□□□ 0.03
Prdm1Q60636 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Gm13226-201ENSMUST00000117838 404 ntBASIC15.26■□□□□ 0.03
Prdm1Q60636 Gm27682-201ENSMUST00000183930 110 ntBASIC15.26■□□□□ 0.03
Prdm1Q60636 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.26■□□□□ 0.03
Prdm1Q60636 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.26■□□□□ 0.03
Prdm1Q60636 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.26■□□□□ 0.03
Prdm1Q60636 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Prdm1Q60636 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Prdm1Q60636 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Prdm1Q60636 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.26■□□□□ 0.03
Prdm1Q60636 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Prdm1Q60636 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.25■□□□□ 0.03
Prdm1Q60636 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.25■□□□□ 0.03
Prdm1Q60636 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Prdm1Q60636 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.25■□□□□ 0.03
Prdm1Q60636 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.25■□□□□ 0.03
Prdm1Q60636 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Prdm1Q60636 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Mir7085-201ENSMUST00000184353 66 ntBASIC15.25■□□□□ 0.03
Prdm1Q60636 Gm27731-201ENSMUST00000185192 107 ntBASIC15.25■□□□□ 0.03
Prdm1Q60636 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.25■□□□□ 0.03
Prdm1Q60636 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.25■□□□□ 0.03
Prdm1Q60636 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.25■□□□□ 0.03
Prdm1Q60636 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Prdm1Q60636 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.25■□□□□ 0.03
Prdm1Q60636 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Prdm1Q60636 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.24■□□□□ 0.03
Prdm1Q60636 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.24■□□□□ 0.03
Prdm1Q60636 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.24■□□□□ 0.03
Prdm1Q60636 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Prdm1Q60636 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC15.24■□□□□ 0.03
Prdm1Q60636 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Prdm1Q60636 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Prdm1Q60636 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Mir686-201ENSMUST00000102174 109 ntBASIC15.24■□□□□ 0.03
Prdm1Q60636 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Prdm1Q60636 Gm14660-201ENSMUST00000119809 575 ntBASIC15.24■□□□□ 0.03
Prdm1Q60636 Gm1335-201ENSMUST00000121653 386 ntBASIC15.24■□□□□ 0.03
Prdm1Q60636 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.24■□□□□ 0.03
Prdm1Q60636 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.24■□□□□ 0.03
Prdm1Q60636 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.24■□□□□ 0.03
Prdm1Q60636 Mir1982-201ENSMUST00000157368 74 ntBASIC15.24■□□□□ 0.03
Prdm1Q60636 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Prdm1Q60636 Gm43818-201ENSMUST00000200605 466 ntBASIC15.24■□□□□ 0.03
Prdm1Q60636 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.24■□□□□ 0.03
Prdm1Q60636 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.24■□□□□ 0.03
Prdm1Q60636 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Prdm1Q60636 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Prdm1Q60636 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms