Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Gm43822-201ENSMUST00000200285 476 ntBASIC13.92□□□□□ -0.18
Shroom1Q5SX79 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Shroom1Q5SX79 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Olfr284-202ENSMUST00000206647 966 ntBASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Shroom1Q5SX79 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Gm7783-201ENSMUST00000204795 781 ntBASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Shroom1Q5SX79 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Shroom1Q5SX79 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.9□□□□□ -0.19
Shroom1Q5SX79 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Shroom1Q5SX79 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Shroom1Q5SX79 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms