Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Gm19931-201ENSMUST00000198920 368 ntBASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Gm15823-201ENSMUST00000064305 670 ntBASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5d-4Q5R1F6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.24□□□□□ -0.61
Trav5d-4Q5R1F6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Itm2b-204ENSMUST00000228637 783 ntBASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav5d-4Q5R1F6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms