Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm13813-201ENSMUST00000120998 787 ntBASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ckap2Q3V1H1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Gm14921-201ENSMUST00000118643 908 ntBASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Gm12363-201ENSMUST00000122250 668 ntBASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Gm4768-201ENSMUST00000206199 686 ntBASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ckap2Q3V1H1 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.96□□□□□ -0.02
Ckap2Q3V1H1 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ckap2Q3V1H1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ckap2Q3V1H1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ckap2Q3V1H1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ckap2Q3V1H1 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ckap2Q3V1H1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ckap2Q3V1H1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ckap2Q3V1H1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Gm26185-201ENSMUST00000157692 266 ntBASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Gm8099-201ENSMUST00000200510 742 ntBASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 Gm32025-201ENSMUST00000217960 307 ntBASIC14.95□□□□□ -0.02
Ckap2Q3V1H1 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms