Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim40Q3UWA4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Gm15460-201ENSMUST00000118147 391 ntBASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim40Q3UWA4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Gm6912-201ENSMUST00000117218 544 ntBASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Gm24420-201ENSMUST00000176676 59 ntBASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Gm27397-201ENSMUST00000184997 107 ntBASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Gm19931-201ENSMUST00000198920 368 ntBASIC12.25□□□□□ -0.45
Trim40Q3UWA4 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.25□□□□□ -0.45
Trim40Q3UWA4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim40Q3UWA4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms