Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cnga4Q3UW12 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm15240-201ENSMUST00000118156 720 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm11779-201ENSMUST00000118541 368 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm12403-201ENSMUST00000121384 959 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cnga4Q3UW12 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Gm8410-201ENSMUST00000117225 605 ntBASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Gm43474-201ENSMUST00000196415 774 ntBASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Gm18905-201ENSMUST00000205454 928 ntBASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Cnga4Q3UW12 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cnga4Q3UW12 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cnga4Q3UW12 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.24□□□□□ -0.29
Cnga4Q3UW12 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cnga4Q3UW12 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Cnga4Q3UW12 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.24□□□□□ -0.29
Cnga4Q3UW12 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 2082.7 ms