Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Gm11618-201ENSMUST00000117946 267 ntBASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkl5Q3UTQ8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Mir1894-201ENSMUST00000122802 81 ntBASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Gm9002-201ENSMUST00000178437 499 ntBASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkl5Q3UTQ8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Gm15806-201ENSMUST00000120696 955 ntBASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Gm6244-201ENSMUST00000178732 841 ntBASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Gm8598-201ENSMUST00000221184 836 ntBASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cdkl5Q3UTQ8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Gm12490-201ENSMUST00000120255 560 ntBASIC15.12■□□□□ 0.01
Cdkl5Q3UTQ8 Gm10156-201ENSMUST00000122364 462 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms