Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lins1Q3U1D0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Gm24255-201ENSMUST00000104481 128 ntBASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Lins1Q3U1D0 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Gm11978-201ENSMUST00000122315 466 ntBASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Gm2991-201ENSMUST00000173338 480 ntBASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Mospd4-201ENSMUST00000180618 576 ntBASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Gm6621-201ENSMUST00000193251 772 ntBASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Gm18056-201ENSMUST00000207670 568 ntBASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Gm18061-201ENSMUST00000208350 562 ntBASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Gm18063-201ENSMUST00000208529 568 ntBASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Gm18052-201ENSMUST00000208750 559 ntBASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Lins1Q3U1D0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Lins1Q3U1D0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lins1Q3U1D0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.52■□□□□ 0.07
Lins1Q3U1D0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Lins1Q3U1D0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Lins1Q3U1D0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Lins1Q3U1D0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lins1Q3U1D0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lins1Q3U1D0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lins1Q3U1D0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Lins1Q3U1D0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Gm3756-201ENSMUST00000169182 1355 ntBASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Lins1Q3U1D0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms