Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Col9a2Q07643 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.14□□□□□ -0.15
Col9a2Q07643 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.14□□□□□ -0.15
Col9a2Q07643 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Mir5132-201ENSMUST00000175166 71 ntBASIC14.14□□□□□ -0.15
Col9a2Q07643 Mospd4-201ENSMUST00000180618 576 ntBASIC14.14□□□□□ -0.15
Col9a2Q07643 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col9a2Q07643 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col9a2Q07643 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a2Q07643 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a2Q07643 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.13□□□□□ -0.15
Col9a2Q07643 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.13□□□□□ -0.15
Col9a2Q07643 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.13□□□□□ -0.15
Col9a2Q07643 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a2Q07643 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.13□□□□□ -0.15
Col9a2Q07643 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a2Q07643 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.13□□□□□ -0.15
Col9a2Q07643 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.13□□□□□ -0.15
Col9a2Q07643 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Col9a2Q07643 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a2Q07643 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.13□□□□□ -0.15
Col9a2Q07643 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a2Q07643 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a2Q07643 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.13□□□□□ -0.15
Col9a2Q07643 Gm3961-201ENSMUST00000204425 994 ntBASIC14.13□□□□□ -0.15
Col9a2Q07643 Gm18056-201ENSMUST00000207670 568 ntBASIC14.13□□□□□ -0.15
Col9a2Q07643 Gm18061-201ENSMUST00000208350 562 ntBASIC14.13□□□□□ -0.15
Col9a2Q07643 Gm18063-201ENSMUST00000208529 568 ntBASIC14.13□□□□□ -0.15
Col9a2Q07643 Gm18052-201ENSMUST00000208750 559 ntBASIC14.13□□□□□ -0.15
Col9a2Q07643 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.13□□□□□ -0.15
Col9a2Q07643 Gm5781-201ENSMUST00000219792 443 ntBASIC14.13□□□□□ -0.15
Col9a2Q07643 Morn2-202ENSMUST00000227729 656 ntBASIC14.13□□□□□ -0.15
Col9a2Q07643 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col9a2Q07643 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col9a2Q07643 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.13□□□□□ -0.15
Col9a2Q07643 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.13□□□□□ -0.15
Col9a2Q07643 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a2Q07643 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a2Q07643 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col9a2Q07643 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col9a2Q07643 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.13□□□□□ -0.15
Col9a2Q07643 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col9a2Q07643 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Col9a2Q07643 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col9a2Q07643 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Col9a2Q07643 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.12□□□□□ -0.15
Col9a2Q07643 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Gm25214-201ENSMUST00000104573 129 ntBASIC14.12□□□□□ -0.15
Col9a2Q07643 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col9a2Q07643 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col9a2Q07643 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.12□□□□□ -0.15
Col9a2Q07643 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Col9a2Q07643 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.12□□□□□ -0.15
Col9a2Q07643 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.12□□□□□ -0.15
Col9a2Q07643 Gm4857-201ENSMUST00000192718 785 ntBASIC14.12□□□□□ -0.15
Col9a2Q07643 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.12□□□□□ -0.15
Col9a2Q07643 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.12□□□□□ -0.15
Col9a2Q07643 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Col9a2Q07643 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col9a2Q07643 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a2Q07643 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a2Q07643 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a2Q07643 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a2Q07643 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a2Q07643 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a2Q07643 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a2Q07643 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.11□□□□□ -0.15
Col9a2Q07643 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col9a2Q07643 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Col9a2Q07643 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col9a2Q07643 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms