Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs3Q05895 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs3Q05895 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.49□□□□□ -0.57
Thbs3Q05895 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Thbs3Q05895 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs3Q05895 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Thbs3Q05895 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.48□□□□□ -0.57
Thbs3Q05895 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Gm11803-201ENSMUST00000119966 444 ntBASIC11.48□□□□□ -0.57
Thbs3Q05895 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.48□□□□□ -0.57
Thbs3Q05895 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Gm28693-202ENSMUST00000190758 331 ntBASIC11.48□□□□□ -0.57
Thbs3Q05895 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Gm10012-201ENSMUST00000078252 192 ntBASIC11.48□□□□□ -0.57
Thbs3Q05895 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Thbs3Q05895 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.48□□□□□ -0.57
Thbs3Q05895 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Thbs3Q05895 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Thbs3Q05895 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Thbs3Q05895 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Thbs3Q05895 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs3Q05895 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.47□□□□□ -0.57
Thbs3Q05895 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.47□□□□□ -0.57
Thbs3Q05895 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Thbs3Q05895 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Thbs3Q05895 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.47□□□□□ -0.57
Thbs3Q05895 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.47□□□□□ -0.57
Thbs3Q05895 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.47□□□□□ -0.57
Thbs3Q05895 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.47□□□□□ -0.57
Thbs3Q05895 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.47□□□□□ -0.57
Thbs3Q05895 Gm8810-201ENSMUST00000172895 754 ntBASIC11.47□□□□□ -0.57
Thbs3Q05895 Gm8652-201ENSMUST00000181363 964 ntBASIC11.47□□□□□ -0.57
Thbs3Q05895 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Thbs3Q05895 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.47□□□□□ -0.57
Thbs3Q05895 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.47□□□□□ -0.57
Thbs3Q05895 Gm5035-201ENSMUST00000215581 927 ntBASIC11.47□□□□□ -0.57
Thbs3Q05895 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.47□□□□□ -0.57
Thbs3Q05895 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.47□□□□□ -0.57
Thbs3Q05895 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Thbs3Q05895 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.47□□□□□ -0.57
Thbs3Q05895 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs3Q05895 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.46□□□□□ -0.57
Thbs3Q05895 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Thbs3Q05895 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms