Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pfdn6Q03958 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.16□□□□□ -0.3
Pfdn6Q03958 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.16□□□□□ -0.3
Pfdn6Q03958 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.16□□□□□ -0.3
Pfdn6Q03958 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.16□□□□□ -0.3
Pfdn6Q03958 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pfdn6Q03958 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfdn6Q03958 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.15□□□□□ -0.3
Pfdn6Q03958 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.15□□□□□ -0.3
Pfdn6Q03958 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.15□□□□□ -0.3
Pfdn6Q03958 Itm2b-204ENSMUST00000228637 783 ntBASIC13.15□□□□□ -0.3
Pfdn6Q03958 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.15□□□□□ -0.3
Pfdn6Q03958 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.15□□□□□ -0.3
Pfdn6Q03958 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.15□□□□□ -0.3
Pfdn6Q03958 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfdn6Q03958 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pfdn6Q03958 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pfdn6Q03958 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Gm16372-201ENSMUST00000073088 450 ntBASIC13.14□□□□□ -0.31
Pfdn6Q03958 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfdn6Q03958 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms