Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Msx2Q03358 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Msx2Q03358 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Msx2Q03358 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Msx2Q03358 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Msx2Q03358 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Msx2Q03358 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Gm12403-201ENSMUST00000121384 959 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Msx2Q03358 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.67□□□□□ -0.38
Msx2Q03358 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.67□□□□□ -0.38
Msx2Q03358 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Msx2Q03358 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.67□□□□□ -0.38
Msx2Q03358 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Msx2Q03358 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Msx2Q03358 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.67□□□□□ -0.38
Msx2Q03358 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.67□□□□□ -0.38
Msx2Q03358 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.67□□□□□ -0.38
Msx2Q03358 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Msx2Q03358 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Msx2Q03358 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Msx2Q03358 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Msx2Q03358 Gm12585-201ENSMUST00000117307 290 ntBASIC12.66□□□□□ -0.38
Msx2Q03358 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.66□□□□□ -0.38
Msx2Q03358 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Msx2Q03358 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Msx2Q03358 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.66□□□□□ -0.38
Msx2Q03358 AW822252-206ENSMUST00000208904 237 ntBASIC12.66□□□□□ -0.38
Msx2Q03358 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.66□□□□□ -0.38
Msx2Q03358 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.66□□□□□ -0.38
Msx2Q03358 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.66□□□□□ -0.38
Msx2Q03358 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Msx2Q03358 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.66□□□□□ -0.38
Msx2Q03358 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Msx2Q03358 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Msx2Q03358 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Msx2Q03358 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Msx2Q03358 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Msx2Q03358 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Msx2Q03358 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms