Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
GabpaQ00422 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Gm10434-201ENSMUST00000101158 471 ntBASIC14.79□□□□□ -0.04
GabpaQ00422 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GabpaQ00422 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.79□□□□□ -0.04
GabpaQ00422 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
GabpaQ00422 Gm15808-201ENSMUST00000119046 604 ntBASIC14.79□□□□□ -0.04
GabpaQ00422 Gm14381-201ENSMUST00000122105 414 ntBASIC14.79□□□□□ -0.04
GabpaQ00422 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.79□□□□□ -0.04
GabpaQ00422 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.79□□□□□ -0.04
GabpaQ00422 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.79□□□□□ -0.04
GabpaQ00422 Gm38092-201ENSMUST00000195600 653 ntBASIC14.79□□□□□ -0.04
GabpaQ00422 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.79□□□□□ -0.04
GabpaQ00422 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.79□□□□□ -0.04
GabpaQ00422 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GabpaQ00422 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GabpaQ00422 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.79□□□□□ -0.04
GabpaQ00422 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GabpaQ00422 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.78□□□□□ -0.04
GabpaQ00422 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.78□□□□□ -0.04
GabpaQ00422 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GabpaQ00422 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.78□□□□□ -0.04
GabpaQ00422 Gm17376-201ENSMUST00000166016 84 ntBASIC14.78□□□□□ -0.04
GabpaQ00422 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
GabpaQ00422 Gm27320-201ENSMUST00000184892 109 ntBASIC14.78□□□□□ -0.04
GabpaQ00422 Gm19931-201ENSMUST00000198920 368 ntBASIC14.78□□□□□ -0.04
GabpaQ00422 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.78□□□□□ -0.04
GabpaQ00422 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.78□□□□□ -0.04
GabpaQ00422 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
GabpaQ00422 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GabpaQ00422 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
GabpaQ00422 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GabpaQ00422 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GabpaQ00422 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GabpaQ00422 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GabpaQ00422 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GabpaQ00422 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.77□□□□□ -0.04
GabpaQ00422 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GabpaQ00422 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GabpaQ00422 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
GabpaQ00422 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GabpaQ00422 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
GabpaQ00422 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.77□□□□□ -0.04
GabpaQ00422 Mir877-201ENSMUST00000104738 85 ntBASIC14.77□□□□□ -0.05
GabpaQ00422 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
GabpaQ00422 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.77□□□□□ -0.05
GabpaQ00422 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.77□□□□□ -0.05
GabpaQ00422 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.77□□□□□ -0.05
GabpaQ00422 Gm20482-202ENSMUST00000174729 825 ntBASIC14.77□□□□□ -0.05
GabpaQ00422 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.77□□□□□ -0.05
GabpaQ00422 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.77□□□□□ -0.05
GabpaQ00422 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.77□□□□□ -0.05
GabpaQ00422 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
GabpaQ00422 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
GabpaQ00422 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
GabpaQ00422 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.77□□□□□ -0.05
GabpaQ00422 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
GabpaQ00422 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms