Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Gabpb1Q00420 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.28□□□□□ -0.28
Gabpb1Q00420 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Gm8515-201ENSMUST00000194852 576 ntBASIC13.28□□□□□ -0.28
Gabpb1Q00420 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabpb1Q00420 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.27□□□□□ -0.28
Gabpb1Q00420 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabpb1Q00420 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabpb1Q00420 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Gabpb1Q00420 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabpb1Q00420 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.27□□□□□ -0.28
Gabpb1Q00420 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Gabpb1Q00420 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Gabpb1Q00420 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabpb1Q00420 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabpb1Q00420 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Gm12091-201ENSMUST00000146791 830 ntBASIC13.27□□□□□ -0.29
Gabpb1Q00420 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.27□□□□□ -0.29
Gabpb1Q00420 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.27□□□□□ -0.29
Gabpb1Q00420 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabpb1Q00420 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Mir686-201ENSMUST00000102174 109 ntBASIC13.26□□□□□ -0.29
Gabpb1Q00420 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Gm13612-201ENSMUST00000119276 390 ntBASIC13.26□□□□□ -0.29
Gabpb1Q00420 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.26□□□□□ -0.29
Gabpb1Q00420 Gm14928-201ENSMUST00000120198 477 ntBASIC13.26□□□□□ -0.29
Gabpb1Q00420 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.26□□□□□ -0.29
Gabpb1Q00420 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.26□□□□□ -0.29
Gabpb1Q00420 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.26□□□□□ -0.29
Gabpb1Q00420 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.26□□□□□ -0.29
Gabpb1Q00420 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.26□□□□□ -0.29
Gabpb1Q00420 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.26□□□□□ -0.29
Gabpb1Q00420 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gabpb1Q00420 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms