Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.28□□□□□ -0.44
Brca2P97929 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.28□□□□□ -0.44
Brca2P97929 Gm28388-201ENSMUST00000186262 437 ntBASIC12.28□□□□□ -0.44
Brca2P97929 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Brca2P97929 AY036118-201ENSMUST00000200021 923 ntBASIC12.28□□□□□ -0.44
Brca2P97929 Gm1821-202ENSMUST00000227415 750 ntBASIC12.28□□□□□ -0.44
Brca2P97929 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Brca2P97929 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.28□□□□□ -0.44
Brca2P97929 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Brca2P97929 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.28□□□□□ -0.44
Brca2P97929 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.28□□□□□ -0.44
Brca2P97929 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.28□□□□□ -0.44
Brca2P97929 Gm4482-201ENSMUST00000200876 742 ntBASIC12.28□□□□□ -0.44
Brca2P97929 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.28□□□□□ -0.44
Brca2P97929 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.28□□□□□ -0.44
Brca2P97929 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.28□□□□□ -0.44
Brca2P97929 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brca2P97929 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.28□□□□□ -0.44
Brca2P97929 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Brca2P97929 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Brca2P97929 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Brca2P97929 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Brca2P97929 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Brca2P97929 Gm15573-201ENSMUST00000119487 540 ntBASIC12.27□□□□□ -0.44
Brca2P97929 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.27□□□□□ -0.44
Brca2P97929 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.27□□□□□ -0.44
Brca2P97929 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.27□□□□□ -0.44
Brca2P97929 Gm27627-201ENSMUST00000183644 150 ntBASIC12.27□□□□□ -0.44
Brca2P97929 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Brca2P97929 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Brca2P97929 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Brca2P97929 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.27□□□□□ -0.44
Brca2P97929 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Brca2P97929 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.27□□□□□ -0.44
Brca2P97929 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Mir6998-201ENSMUST00000183343 64 ntBASIC12.27□□□□□ -0.45
Brca2P97929 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Brca2P97929 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.27□□□□□ -0.45
Brca2P97929 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.27□□□□□ -0.45
Brca2P97929 Gm3619-201ENSMUST00000219947 775 ntBASIC12.27□□□□□ -0.45
Brca2P97929 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Gm19994-201ENSMUST00000217086 586 ntBASIC12.27□□□□□ -0.45
Brca2P97929 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.27□□□□□ -0.45
Brca2P97929 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Brca2P97929 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Brca2P97929 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Brca2P97929 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Brca2P97929 Gm13736-201ENSMUST00000119272 253 ntBASIC12.26□□□□□ -0.45
Brca2P97929 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Gm18038-201ENSMUST00000197900 485 ntBASIC12.26□□□□□ -0.45
Brca2P97929 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Brca2P97929 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Brca2P97929 Gm10731-201ENSMUST00000181171 448 ntBASIC12.26□□□□□ -0.45
Brca2P97929 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms