Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.38□□□□□ -0.43
Nkx3-2P97503 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.38□□□□□ -0.43
Nkx3-2P97503 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.38□□□□□ -0.43
Nkx3-2P97503 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nkx3-2P97503 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.37□□□□□ -0.43
Nkx3-2P97503 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Gm23931-201ENSMUST00000103842 109 ntBASIC12.37□□□□□ -0.43
Nkx3-2P97503 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Gm11618-201ENSMUST00000117946 267 ntBASIC12.37□□□□□ -0.43
Nkx3-2P97503 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Gm8062-201ENSMUST00000139696 444 ntBASIC12.37□□□□□ -0.43
Nkx3-2P97503 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Gm17420-201ENSMUST00000164753 153 ntBASIC12.37□□□□□ -0.43
Nkx3-2P97503 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.37□□□□□ -0.43
Nkx3-2P97503 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Pck2-205ENSMUST00000226352 2784 ntBASIC12.37□□□□□ -0.43
Nkx3-2P97503 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.37□□□□□ -0.43
Nkx3-2P97503 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx3-2P97503 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.36□□□□□ -0.43
Nkx3-2P97503 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.36□□□□□ -0.43
Nkx3-2P97503 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Gm5187-201ENSMUST00000117317 991 ntBASIC12.36□□□□□ -0.43
Nkx3-2P97503 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.36□□□□□ -0.43
Nkx3-2P97503 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Gm5370-201ENSMUST00000187187 574 ntBASIC12.36□□□□□ -0.43
Nkx3-2P97503 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx3-2P97503 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.36□□□□□ -0.43
Nkx3-2P97503 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms