Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc1P97496 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc1P97496 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc1P97496 Gm8908-201ENSMUST00000121633 1024 ntBASIC16.3■□□□□ 0.2
Smarcc1P97496 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC16.3■□□□□ 0.2
Smarcc1P97496 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc1P97496 Gm20426-201ENSMUST00000173657 440 ntBASIC16.3■□□□□ 0.2
Smarcc1P97496 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.3■□□□□ 0.2
Smarcc1P97496 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smarcc1P97496 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc1P97496 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.3■□□□□ 0.2
Smarcc1P97496 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smarcc1P97496 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.3■□□□□ 0.2
Smarcc1P97496 AC126444.1-201ENSMUST00000225938 1768 ntBASIC16.3■□□□□ 0.2
Smarcc1P97496 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc1P97496 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc1P97496 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc1P97496 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smarcc1P97496 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Smarcc1P97496 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC16.29■□□□□ 0.2
Smarcc1P97496 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.29■□□□□ 0.2
Smarcc1P97496 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.29■□□□□ 0.2
Smarcc1P97496 Gm44651-201ENSMUST00000207343 372 ntBASIC16.29■□□□□ 0.2
Smarcc1P97496 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC16.29■□□□□ 0.2
Smarcc1P97496 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.29■□□□□ 0.2
Smarcc1P97496 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smarcc1P97496 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Smarcc1P97496 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC16.28■□□□□ 0.2
Smarcc1P97496 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.28■□□□□ 0.2
Smarcc1P97496 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC16.28■□□□□ 0.2
Smarcc1P97496 Gm44100-201ENSMUST00000204329 436 ntBASIC16.28■□□□□ 0.2
Smarcc1P97496 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC16.28■□□□□ 0.2
Smarcc1P97496 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.28■□□□□ 0.2
Smarcc1P97496 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smarcc1P97496 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smarcc1P97496 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Gm4864-201ENSMUST00000219894 1461 ntBASIC16.28■□□□□ 0.2
Smarcc1P97496 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.28■□□□□ 0.2
Smarcc1P97496 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smarcc1P97496 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smarcc1P97496 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 Gm13996-201ENSMUST00000118456 430 ntBASIC16.27■□□□□ 0.2
Smarcc1P97496 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 Mir1943-201ENSMUST00000158276 73 ntBASIC16.27■□□□□ 0.2
Smarcc1P97496 Gm23363-201ENSMUST00000175024 79 ntBASIC16.27■□□□□ 0.2
Smarcc1P97496 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Smarcc1P97496 Gm8546-201ENSMUST00000178288 1264 ntBASIC16.27■□□□□ 0.2
Smarcc1P97496 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC16.27■□□□□ 0.2
Smarcc1P97496 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 Gm45224-201ENSMUST00000208203 414 ntBASIC16.27■□□□□ 0.2
Smarcc1P97496 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC16.27■□□□□ 0.2
Smarcc1P97496 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.27■□□□□ 0.2
Smarcc1P97496 AC154680.1-201ENSMUST00000224376 859 ntBASIC16.27■□□□□ 0.2
Smarcc1P97496 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smarcc1P97496 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smarcc1P97496 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.27■□□□□ 0.19
Smarcc1P97496 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.27■□□□□ 0.19
Smarcc1P97496 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms