Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.32□□□□□ -0.12
Lig3P97386 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.32□□□□□ -0.12
Lig3P97386 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lig3P97386 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lig3P97386 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Lig3P97386 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.31□□□□□ -0.12
Lig3P97386 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.31□□□□□ -0.12
Lig3P97386 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
Lig3P97386 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.31□□□□□ -0.12
Lig3P97386 Gm15808-201ENSMUST00000119046 604 ntBASIC14.31□□□□□ -0.12
Lig3P97386 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Mir5132-201ENSMUST00000175166 71 ntBASIC14.31□□□□□ -0.12
Lig3P97386 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lig3P97386 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lig3P97386 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Lig3P97386 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lig3P97386 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lig3P97386 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.31□□□□□ -0.12
Lig3P97386 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.31□□□□□ -0.12
Lig3P97386 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lig3P97386 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lig3P97386 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lig3P97386 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.31□□□□□ -0.12
Lig3P97386 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lig3P97386 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lig3P97386 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Lig3P97386 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.3□□□□□ -0.12
Lig3P97386 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lig3P97386 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.3□□□□□ -0.12
Lig3P97386 Gm11803-201ENSMUST00000119966 444 ntBASIC14.3□□□□□ -0.12
Lig3P97386 Gm13342-201ENSMUST00000121055 207 ntBASIC14.3□□□□□ -0.12
Lig3P97386 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Gm44397-201ENSMUST00000195950 113 ntBASIC14.3□□□□□ -0.12
Lig3P97386 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lig3P97386 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.3□□□□□ -0.12
Lig3P97386 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.3□□□□□ -0.12
Lig3P97386 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lig3P97386 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Lig3P97386 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lig3P97386 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.29□□□□□ -0.12
Lig3P97386 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lig3P97386 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.29□□□□□ -0.12
Lig3P97386 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lig3P97386 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.29□□□□□ -0.12
Lig3P97386 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.29□□□□□ -0.12
Lig3P97386 Gm26083-201ENSMUST00000157904 193 ntBASIC14.29□□□□□ -0.12
Lig3P97386 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.29□□□□□ -0.12
Lig3P97386 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.29□□□□□ -0.12
Lig3P97386 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.29□□□□□ -0.12
Lig3P97386 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.29□□□□□ -0.12
Lig3P97386 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.29□□□□□ -0.12
Lig3P97386 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Lig3P97386 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lig3P97386 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms