Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.82□□□□□ -0.68
Ccl21aP84444 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Ccl21aP84444 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl21aP84444 Gm12029-201ENSMUST00000120073 832 ntBASIC10.82□□□□□ -0.68
Ccl21aP84444 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.82□□□□□ -0.68
Ccl21aP84444 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl21aP84444 Gm19353-201ENSMUST00000184561 445 ntBASIC10.82□□□□□ -0.68
Ccl21aP84444 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.82□□□□□ -0.68
Ccl21aP84444 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ccl21aP84444 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ccl21aP84444 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl21aP84444 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl21aP84444 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Ccl21aP84444 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.81□□□□□ -0.68
Ccl21aP84444 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Gm11450-201ENSMUST00000121144 333 ntBASIC10.81□□□□□ -0.68
Ccl21aP84444 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.81□□□□□ -0.68
Ccl21aP84444 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Gm10051-201ENSMUST00000145209 414 ntBASIC10.81□□□□□ -0.68
Ccl21aP84444 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ccl21aP84444 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.81□□□□□ -0.68
Ccl21aP84444 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.81□□□□□ -0.68
Ccl21aP84444 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ccl21aP84444 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ccl21aP84444 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl21aP84444 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.81□□□□□ -0.68
Ccl21aP84444 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.81□□□□□ -0.68
Ccl21aP84444 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ccl21aP84444 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ccl21aP84444 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ccl21aP84444 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.8□□□□□ -0.68
Ccl21aP84444 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.8□□□□□ -0.68
Ccl21aP84444 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ccl21aP84444 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Ccl21aP84444 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ccl21aP84444 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.8□□□□□ -0.68
Ccl21aP84444 Gm13045-201ENSMUST00000119019 712 ntBASIC10.8□□□□□ -0.68
Ccl21aP84444 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.8□□□□□ -0.68
Ccl21aP84444 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ccl21aP84444 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.8□□□□□ -0.68
Ccl21aP84444 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.8□□□□□ -0.68
Ccl21aP84444 Gm27627-201ENSMUST00000183644 150 ntBASIC10.8□□□□□ -0.68
Ccl21aP84444 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms