Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
SgcaP82350 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
SgcaP82350 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
SgcaP82350 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SgcaP82350 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.96□□□□□ -0.65
SgcaP82350 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
SgcaP82350 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SgcaP82350 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.96□□□□□ -0.65
SgcaP82350 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.96□□□□□ -0.65
SgcaP82350 Gm12260-201ENSMUST00000122447 411 ntBASIC10.96□□□□□ -0.65
SgcaP82350 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
SgcaP82350 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Mir8117-201ENSMUST00000184773 107 ntBASIC10.96□□□□□ -0.65
SgcaP82350 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SgcaP82350 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SgcaP82350 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.96□□□□□ -0.65
SgcaP82350 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcaP82350 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcaP82350 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SgcaP82350 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcaP82350 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcaP82350 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.96□□□□□ -0.66
SgcaP82350 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SgcaP82350 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC10.96□□□□□ -0.66
SgcaP82350 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.95□□□□□ -0.66
SgcaP82350 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.95□□□□□ -0.66
SgcaP82350 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SgcaP82350 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.95□□□□□ -0.66
SgcaP82350 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.95□□□□□ -0.66
SgcaP82350 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.95□□□□□ -0.66
SgcaP82350 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SgcaP82350 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SgcaP82350 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.95□□□□□ -0.66
SgcaP82350 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.95□□□□□ -0.66
SgcaP82350 Gm18206-201ENSMUST00000207027 926 ntBASIC10.95□□□□□ -0.66
SgcaP82350 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SgcaP82350 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
SgcaP82350 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SgcaP82350 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.95□□□□□ -0.66
SgcaP82350 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SgcaP82350 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
SgcaP82350 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.95□□□□□ -0.66
SgcaP82350 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
SgcaP82350 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
SgcaP82350 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
SgcaP82350 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SgcaP82350 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms