Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Gm11918-201ENSMUST00000121660 179 ntBASIC13.02□□□□□ -0.33
Ldb1P70662 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.02□□□□□ -0.33
Ldb1P70662 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.02□□□□□ -0.33
Ldb1P70662 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.02□□□□□ -0.33
Ldb1P70662 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.02□□□□□ -0.33
Ldb1P70662 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ldb1P70662 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.02□□□□□ -0.33
Ldb1P70662 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ldb1P70662 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ldb1P70662 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.02□□□□□ -0.33
Ldb1P70662 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Ldb1P70662 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Ldb1P70662 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.01□□□□□ -0.33
Ldb1P70662 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ldb1P70662 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ldb1P70662 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ldb1P70662 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ldb1P70662 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ldb1P70662 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13□□□□□ -0.33
Ldb1P70662 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13□□□□□ -0.33
Ldb1P70662 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ldb1P70662 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13□□□□□ -0.33
Ldb1P70662 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13□□□□□ -0.33
Ldb1P70662 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13□□□□□ -0.33
Ldb1P70662 Gm38671-201ENSMUST00000200573 130 ntBASIC13□□□□□ -0.33
Ldb1P70662 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13□□□□□ -0.33
Ldb1P70662 Gm18473-201ENSMUST00000220543 868 ntBASIC13□□□□□ -0.33
Ldb1P70662 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13□□□□□ -0.33
Ldb1P70662 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ldb1P70662 AC125117.1-201ENSMUST00000228121 468 ntBASIC13□□□□□ -0.33
Ldb1P70662 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ldb1P70662 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Gm45003-201ENSMUST00000205875 2158 ntBASIC13□□□□□ -0.33
Ldb1P70662 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Ldb1P70662 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ldb1P70662 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms