Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.5□□□□□ -0.25
Smad1P70340 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Smad1P70340 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.5□□□□□ -0.25
Smad1P70340 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.49□□□□□ -0.25
Smad1P70340 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
Smad1P70340 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Smad1P70340 Gm13392-201ENSMUST00000117708 150 ntBASIC13.49□□□□□ -0.25
Smad1P70340 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.49□□□□□ -0.25
Smad1P70340 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.49□□□□□ -0.25
Smad1P70340 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.49□□□□□ -0.25
Smad1P70340 Snora78-201ENSMUST00000158630 128 ntBASIC13.49□□□□□ -0.25
Smad1P70340 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.49□□□□□ -0.25
Smad1P70340 Gm29608-201ENSMUST00000190444 463 ntBASIC13.49□□□□□ -0.25
Smad1P70340 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Smad1P70340 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.49□□□□□ -0.25
Smad1P70340 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.49□□□□□ -0.25
Smad1P70340 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smad1P70340 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.48□□□□□ -0.25
Smad1P70340 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.48□□□□□ -0.25
Smad1P70340 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Smad1P70340 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.48□□□□□ -0.25
Smad1P70340 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Smad1P70340 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.48□□□□□ -0.25
Smad1P70340 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Smad1P70340 Gm15376-201ENSMUST00000122258 783 ntBASIC13.48□□□□□ -0.25
Smad1P70340 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.48□□□□□ -0.25
Smad1P70340 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Smad1P70340 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smad1P70340 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.48□□□□□ -0.25
Smad1P70340 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Gm42693-201ENSMUST00000196779 631 ntBASIC13.48□□□□□ -0.25
Smad1P70340 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.48□□□□□ -0.25
Smad1P70340 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.48□□□□□ -0.25
Smad1P70340 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.48□□□□□ -0.25
Smad1P70340 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.48□□□□□ -0.25
Smad1P70340 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smad1P70340 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.47□□□□□ -0.25
Smad1P70340 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smad1P70340 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smad1P70340 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
Smad1P70340 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smad1P70340 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smad1P70340 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smad1P70340 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smad1P70340 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smad1P70340 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Smad1P70340 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smad1P70340 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smad1P70340 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Smad1P70340 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.47□□□□□ -0.25
Smad1P70340 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smad1P70340 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smad1P70340 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.47□□□□□ -0.25
Smad1P70340 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.47□□□□□ -0.25
Smad1P70340 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.47□□□□□ -0.25
Smad1P70340 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smad1P70340 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smad1P70340 Gm10478-201ENSMUST00000084451 396 ntBASIC13.47□□□□□ -0.25
Smad1P70340 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms